diff --git a/cmd/main.go b/cmd/main.go
index d541f0a..efec73d 100644
--- a/cmd/main.go
+++ b/cmd/main.go
@@ -7,7 +7,6 @@ import (
 
 func main() {
 	logging.Init()
-
-	srv := server.New(nil, ":8080")
+	srv := server.New(":6969")
 	srv.Start()
 }
diff --git a/core/handlers/init.go b/core/handlers/init.go
index f6ff12b..d5384f5 100644
--- a/core/handlers/init.go
+++ b/core/handlers/init.go
@@ -6,7 +6,7 @@ import (
 	"github.com/KristianJBorgwarth/dendrite.daemon/persistence"
 )
 
-type initializeParams struct {
+type initializeCommand struct {
 	VaultPath   string `json:"vaultPath"`
 	TemplateDir string `json:"templateDir"`
 
@@ -23,7 +23,7 @@ type initializeParams struct {
 }
 
 func Initialize(raw json.RawMessage) (*config.Config, error) {
-	var params initializeParams
+	var params initializeCommand
 
 	if err := json.Unmarshal(raw, &params); err != nil {
 		return nil, err
diff --git a/core/http/server.go b/core/http/server.go
index 7c55fd1..17cb995 100644
--- a/core/http/server.go
+++ b/core/http/server.go
@@ -2,17 +2,21 @@
 package server
 
 import (
+	"encoding/json"
 	"log/slog"
 	"net/http"
 
+	"github.com/KristianJBorgwarth/dendrite.daemon/config"
+	"github.com/KristianJBorgwarth/dendrite.daemon/core/handlers"
 	"github.com/KristianJBorgwarth/dendrite.daemon/core/rpc"
 )
 
 type Server struct {
-	addr string
+	addr   string
+	config *config.Config
 }
 
-func New(log *slog.Logger, addr string) *Server {
+func New(addr string) *Server {
 	return &Server{
 		addr: addr,
 	}
@@ -22,7 +26,47 @@ func (s *Server) Start() error {
 	slog.Info("server started")
 	mux := http.NewServeMux()
 
-	mux.HandleFunc("/rpc", rpc.RPCHandler)
+	mux.HandleFunc("/rpc", s.RPCHandler)
 
 	return http.ListenAndServe(s.addr, mux)
 }
+
+func (s *Server) RPCHandler(w http.ResponseWriter, r *http.Request) {
+	var req rpc.Request
+
+	if err := json.NewDecoder(r.Body).Decode(&req); err != nil {
+		http.Error(w, "Invalid JSON", http.StatusBadRequest)
+		return
+	}
+
+	resp := rpc.Response{
+		Jsonrpc: "2.0",
+		ID:      req.ID,
+	}
+
+	switch req.Method {
+	case "initialize":
+		cfg, err := handlers.Initialize(req.Params)
+		if err != nil {
+			resp.Error = map[string]any{
+				"code":    -1,
+				"message": err.Error(),
+			}
+		} else {
+			s.config = cfg
+			resp.Result = map[string]any{"status": "ok"}
+		}
+	default:
+		slog.Warn("Unknown method", "method", req.Method)
+		resp.Error = map[string]any{
+			"code":    -32601,
+			"message": "method not found",
+		}
+	}
+
+	w.Header().Set("Content-Type", "application/json")
+
+	if err := json.NewEncoder(w).Encode(resp); err != nil {
+		slog.Error("failed to write response", "error", err)
+	}
+}
diff --git a/core/rpc/rpc_handler.go b/core/rpc/models.go
similarity index 54%
rename from core/rpc/rpc_handler.go
rename to core/rpc/models.go
index 49db38f..ca359f5 100644
--- a/core/rpc/rpc_handler.go
+++ b/core/rpc/models.go
@@ -3,9 +3,6 @@ package rpc
 
 import (
 	"encoding/json"
-	"net/http"
-
-	"github.com/KristianJBorgwarth/dendrite.daemon/core/handlers"
 )
 
 type Request struct {
@@ -28,28 +25,3 @@ type Notification struct {
 	Params  json.RawMessage `json:"params,omitempty"`
 }
 
-func RPCHandler(w http.ResponseWriter, r *http.Request) {
-	var req Request
-
-	if err := json.NewDecoder(r.Body).Decode(&req); err != nil {
-		http.Error(w, "Invalid JSON", http.StatusBadRequest)
-		return
-	}
-
-	resp := Response{
-		Jsonrpc: "2.0",
-		ID:      req.ID,
-	}
-
-	switch req.Method {
-	case "initialize":
-		result, err := handlers.Initialize(req.Params)
-		if err != nil {
-			resp.Error = err.Error()
-		} else {
-			resp.Result = result
-		}
-	default:
-		resp.Error = "Method not found"
-	}
-}
diff --git a/persistence/db_migrator.go b/persistence/db_migrator.go
index e2cb22a..87541af 100644
--- a/persistence/db_migrator.go
+++ b/persistence/db_migrator.go
@@ -3,6 +3,7 @@ package persistence
 
 import (
 	"database/sql"
+	"log/slog"
 	"os"
 	"path/filepath"
 	"sort"
@@ -20,6 +21,7 @@ func InitializeIndex(vaulPath string) error {
 	migrationsDir := filepath.Join("persistence", "migrations")
 
 	if err := applyMigrations(db, migrationsDir); err != nil {
+		slog.Error("failed to apply migrations", "error", err)
 		return err
 	}
 	return nil
diff --git a/persistence/repositories/doc.go b/persistence/repositories/doc.go
new file mode 100644
index 0000000..0660717
--- /dev/null
+++ b/persistence/repositories/doc.go
@@ -0,0 +1,6 @@
+// Package repositories provides an interface for accessing dendrite index and configuration
+package repositories 
+
+
+
+